Genome sequence of the Lotus corniculatus microsymbiont Mesorhizobium loti strain R88B [electronic resource]
Mesorhizobium loti strain R88B was isolated in 1993 in the Rocklands range in Otago, New Zealand from a Lotus corniculatus root nodule. R88B is an aerobic, Gram-negative, non-spore-forming rod. This report reveals the genome of M. loti strain R88B contains a single scaffold of size 7,195,110 bp whic...
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| Language: | English |
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Oak Ridge, Tenn. :
Distributed by the Office of Scientific and Technical Information, U.S. Department of Energy,
2014.
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| Subjects: |
MARC
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| 245 | 0 | 0 | |a Genome sequence of the Lotus corniculatus microsymbiont Mesorhizobium loti strain R88B |h [electronic resource] |
| 260 | |a Oak Ridge, Tenn. : |b Distributed by the Office of Scientific and Technical Information, U.S. Department of Energy, |c 2014. | ||
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| 500 | |a 12/08/2014. | ||
| 500 | |a "Journal ID: ISSN 1944-3277." | ||
| 500 | |a "Other: PII: 3." | ||
| 500 | |a Reeve, Wayne ; Sullivan, John ; Ronson, Clive ; Tian, Rui ; Br䵬 Lambert ; Davenport, Karen ; Goodwin, Lynne ; Chain, Patrick ; Woyke, Tanja ; Lobos, Elizabeth ; Huntemann, Marcel ; Pati, Amrita ; Mavromatis, Konstantinos ; Markowitz, Victor ; Ivanova, Natalia ; Kyrpides, Nikos | ||
| 500 | |a Los Alamos National Lab. (LANL), Los Alamos, NM (United States) | ||
| 500 | |a USDOE Joint Genome Institute (JGI), Walnut Creek, CA (United States) | ||
| 500 | |a Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States) | ||
| 500 | |a USDOE Office of Science (SC), Biological and Environmental Research (BER) (SC-23) | ||
| 520 | 3 | |a Mesorhizobium loti strain R88B was isolated in 1993 in the Rocklands range in Otago, New Zealand from a Lotus corniculatus root nodule. R88B is an aerobic, Gram-negative, non-spore-forming rod. This report reveals the genome of M. loti strain R88B contains a single scaffold of size 7,195,110 bp which encodes 6,950 protein-coding genes and 66 RNA-only encoding genes. This genome does not harbor any plasmids but contains the integrative and conjugative element ICEMl Sym<sup>R7A</sup>, also known as the R7A symbiosis island, acquired by horizontal gene transfer in the field environment from M. loti strain R7A. It also contains a mobilizable genetic element ICEMl adh<sup>R88B</sup>, that encodes a likely adhesin gene which has integrated downstream of ICEMl Sym<sup>R7A</sup>, and three acquired loci that together allow the utilization of the siderophore ferrichrome. This rhizobial genome is one of 100 sequenced as part of the DOE Joint Genome Institute 2010 Genomic Encyclopedia for Bacteria and Archaea-Root Nodule Bacteria (GEBA-RNB) project. | |
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| 650 | 7 | |a 59 basic biological sciences |2 local. | |
| 650 | 7 | |a Alphaproteobacteria |2 local. | |
| 650 | 7 | |a Symbiosis |2 local. | |
| 650 | 7 | |a Nitrogen fixation |2 local. | |
| 650 | 7 | |a Root-nodule bacteria |2 local. | |
| 710 | 1 | |a United States. |b Department of Energy. |b Office of Scientific and Technical Information |4 dst. | |
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